The detailed information of tRNA gene sequence


Sequence ID>W131237464
Genome IDAUOM01000159
Search identical group
Phylum/ClassAlphaproteobacteria
Speciesalpha proteobacterium JGI 0001002-C12 [AUOM]
Start position on genome 34573
End posion on genome 34497
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acggcgcgtg
tRNA gene sequence 
GGGCCTGTAGCTCAATTGGTTAGAGCCGGCCGCTCATAACGGCTTGGTTGCGGGTTCGAG
TCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
tacgcctccc
Secondary structure (Cloverleaf model)
>W131237464	Met	CAT
                   g      ACCA tacgcctccc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        C     TGGTT
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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