The detailed information of tRNA gene sequence


Sequence ID>W1711378332
Genome IDMDZN01000032
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesYersinia ruckeri [MDZN]
Start position on genome 180317
End posion on genome 180406
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acaacaaaac
tRNA gene sequence 
GGTGAGGTGTCTGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGCGTAAGTGTA
TCGAGGGTTCGAACCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
tattgagtat
Secondary structure (Cloverleaf model)
>W1711378332	Ser	GGA
                   c      GCCA tattgagtat
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          C A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C T       G A G G G     C
    G         + | |                 T T
    C       A G G A
      T G A        G     TATACGCGTAAGTGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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