The detailed information of tRNA gene sequence


Sequence ID>W131244766
Genome IDCAQJ01000021
Search identical group
Phylum/ClassNitrospinota
SpeciesNitrospina gracilis 3/211 [CAQJ]
Start position on genome 46834
End posion on genome 46920
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aataacaaat
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTTGAAGGCGCACGCTTGGAAAGCGTGTGTAGGTGACCCCTAC
CGAGGGTTCGAATCCCTCCCTCTCCGCtc
Downstream region at tRNA end position 
ccttacaggg
Secondary structure (Cloverleaf model)
>W131244766	Ser	GGA
                   t      GCtc ccttacaggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TGTAGGTGACCCCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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