The detailed information of tRNA gene sequence


Sequence ID>W131244776
Genome IDCAQJ01000031
Search identical group
Phylum/ClassNitrospinota
SpeciesNitrospina gracilis 3/211 [CAQJ]
Start position on genome 12884
End posion on genome 12959
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaaatgagat
tRNA gene sequence 
AGGCCAGTAGCTCTAATTGGTTAGAGCACTAGACTCCAAATCTAGGGGTTGGGGGTTCGA
ATCCCTCCTGGCCTGCgt
Downstream region at tRNA end position 
gcttacgcat
Secondary structure (Cloverleaf model)
>W131244776	Trp	CCA
                   t      GCgt gcttacgcat
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
    T A A T        A      | + | | |     G
  T         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          A     GGGTT
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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