The detailed information of tRNA gene sequence


Sequence ID>W1711386000
Genome IDMEEV01000014
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesPelagibacterium sp. SCN 64-44 [MEEV]
Start position on genome 123558
End posion on genome 123632
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttcttgctcc
tRNA gene sequence 
GCGCCCATCGTCTAGCGGTCAGGACACCGCCCTCTCACGGCGGGAACAGGGGTTCGATTC
CCCTTGGGCGTACCA
Downstream region at tRNA end position 
agattttttt
Secondary structure (Cloverleaf model)
>W1711386000	Glu	CTC
                   c      ACCA agattttttt
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     T C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      C A          A     GAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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