The detailed information of tRNA gene sequence


Sequence ID>W1711387384
Genome IDMEGP01000002
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesThiobacillus sp. SCN 63-57 [MEGP]
Start position on genome 114471
End posion on genome 114375
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gggtttcaat
tRNA gene sequence 
TGGAAGGGAAGCGTGCCTGGTGGTGCGGCCGGACTTCAAATTCGGTTGGGGGTGTCAGTC
GCTCCCGGGTGGGTTCGACTCCCACTTCCTTCCGCCAt
Downstream region at tRNA end position 
tattctggac
Secondary structure (Cloverleaf model)
>W1711387384	SeC	TCA
                   t      CCAt tattctggac
                     T + G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C          C C
                    G     T T C A C     T
    C C G T        A      + + | |       C
  T         G C G A       G G G T T     A
  G         + | |                   C G
  G         T G C G
    T G G          G     TTGGGGGTGTCAGTCGCTCCCGGGT
                    C - G
                    C - G
                    G - C
                    G + T
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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