The detailed information of tRNA gene sequence


Sequence ID>W131090166
Genome IDAOFR01000008
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBordetella holmesii H558 [AOFR]
Start position on genome 119
End posion on genome 43
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaggtttcgc
tRNA gene sequence 
GGGTCTGTAGCTCAGTCGGTTAGAGCACCGTCTTGATAAGGCGGGNGTCGTTGGTTCGAA
TCCAACCAGACCCACCA
Downstream region at tRNA end position 
aggtttcctg
Secondary structure (Cloverleaf model)
>W131090166	Ile	GAT
                   c      ACCA aggtttcctg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     C A A C C     A
      T G A        A      | | | | |     G
    C       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GNGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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