The detailed information of tRNA gene sequence


Sequence ID>W1711391629
Genome IDMELW01000320
Search identical group
Phylum/ClassBacillota
SpeciesAlicyclobacillus sp. RIFOXYA1_FULL_53_8 [MELW]
Start position on genome 18573
End posion on genome 18662
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aacagaccac
tRNA gene sequence 
GGAGAGGTGGTCGAGTGGTTGAAGGCAGCGGTCTTGAAAACCGCCGTGTTCGTAAGGGCA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
taacgaattt
Secondary structure (Cloverleaf model)
>W1711391629	Ser	TGA
                   c      GCCA taacgaattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C T G       G T G G G     C
    G         | + |                 T T
    T       A G G C
      T G A        A     CGTGTTCGTAAGGGCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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