The detailed information of tRNA gene sequence


Sequence ID>W1711391986
Genome IDMENA01000152
Search identical group
Phylum/ClassArmatimonadota
SpeciesArmatimonadetes bacterium RBG_16_67_12 [MENA]
Start position on genome 950
End posion on genome 855
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
cgcgactcac
tRNA gene sequence 
GGAGGGCAGTGTCCGCTGGTGCGGGCCCCGGTCTTCAAAACCGGCCGCTGGGCCGGATCG
GTCCAGGCTGGGTTCGATTCCCAGGGCCCTCCGCCA
Downstream region at tRNA end position 
acctgcccgg
Secondary structure (Cloverleaf model)
>W1711391986	SeC(p)	TCA
                   c      GCCA acctgcccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A   G          T T
                    G     G A C C C     A
      T C G        T      | | | | |     G
    G       C C T G       C T G G G     C
    G       | | + |                 T T
    T       G G G C
      G C          C     CCGCTGGGCCGGATCGGTCCAGG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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