The detailed information of tRNA gene sequence


Sequence ID>W1711395057
Genome IDMESS01000030
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix sp. RBG_13_44_9 [MESS]
Start position on genome 6436
End posion on genome 6360
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagctaatat
tRNA gene sequence 
CGCGGGGTGGAGCAGTTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAA
TCCTGCCCCCGCTACTA
Downstream region at tRNA end position 
atgacactgt
Secondary structure (Cloverleaf model)
>W1711395057	Met	CAT
                   t      ACTA atgacactgt
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    T       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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