The detailed information of tRNA gene sequence


Sequence ID>W1711395058
Genome IDMESS01000030
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix sp. RBG_13_44_9 [MESS]
Start position on genome 6316
End posion on genome 6242
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttatcatact
tRNA gene sequence 
GGCGGCGTAGCTCAGTCGGTTAGAGCATCGGAATCATAATCCGAGTGTCCGGGGTTCGAA
TCCCTGCGCCGCTACtt
Downstream region at tRNA end position 
tctaaatcct
Secondary structure (Cloverleaf model)
>W1711395058	Met	CAT
                   t      ACtt tctaaatcct
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     G T C C C     A
      T G A        A      | + | | |     G
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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