The detailed information of tRNA gene sequence


Sequence ID>W1711395060
Genome IDMESS01000070
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix sp. RBG_13_44_9 [MESS]
Start position on genome 24821
End posion on genome 24912
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttttataaac
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTTGAACGGGCACGCCTGGAGAGCGTGTGTTCTCTTAACGGGG
AACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gggtatataa
Secondary structure (Cloverleaf model)
>W1711395060	Ser	GGA
                   c      GCCA gggtatataa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G A G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TGTTCTCTTAACGGGGAACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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