The detailed information of tRNA gene sequence


Sequence ID>W1711395068
Genome IDMESS01000102
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix sp. RBG_13_44_9 [MESS]
Start position on genome 18708
End posion on genome 18785
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aaattaggaa
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTTAGCGCACCTGCCTTGGGAGCAGGGGGTCGCTGGTTCAA
ATCCAGTCGCCCCGACTA
Downstream region at tRNA end position 
aatacaagaa
Secondary structure (Cloverleaf model)
>W1711395068	Pro	TGG
                   a      ACTA aatacaagaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G A C C     A
    C C G A        A      + | | | |     A
  T         C G C G       G C T G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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