The detailed information of tRNA gene sequence


Sequence ID>W1711395074
Genome IDMESS01000137
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix sp. RBG_13_44_9 [MESS]
Start position on genome 26292
End posion on genome 26378
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atatttttcc
tRNA gene sequence 
GGAGGGCTAGACCTAACTGGTAAGGCGGCGGTCTTGAAAACCGCTGGGAGCAATCCCTTG
GGGGTTCGAGTCCCTCGCCCTCCGCTA
Downstream region at tRNA end position 
cacaagaata
Secondary structure (Cloverleaf model)
>W1711395074	Ser	TGA
                   c      GCTA cacaagaata
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T G
                    T     C T C C C     A
      A A T        A      | + | | |     G
    C       C C A G       G G G G G     C
    T         |   |                 T T
    G       A G G C
      G T A        G     TGGGAGCAATCCCTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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