The detailed information of tRNA gene sequence


Sequence ID>W1711395079
Genome IDMESS01000148
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix sp. RBG_13_44_9 [MESS]
Start position on genome 20155
End posion on genome 20231
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
taaagtatac
tRNA gene sequence 
GGGGTCGTAGTTCAGTTGGTCAGAACGCCGGCCTGTCACGCCGGAAGTCGCGAGTTCGAG
TCTCGTCGGCCCCGCCA
Downstream region at tRNA end position 
agggccttag
Secondary structure (Cloverleaf model)
>W1711395079	Asp	GTC
                   c      GCCA agggccttag
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | |                 T T
    G       G A A C
      T C A        G     AAGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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