The detailed information of tRNA gene sequence


Sequence ID>W1711395081
Genome IDMESS01000153
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix sp. RBG_13_44_9 [MESS]
Start position on genome 356
End posion on genome 280
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
agcgattttt
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGCTAGAGCGCTGCGCTCACATCGCAGAGGTCACTGGTTCAAA
TCCAGTACTGCCCACCA
Downstream region at tRNA end position 
atagatattt
Secondary structure (Cloverleaf model)
>W1711395081	Val	CAC
                   t      ACCA atagatattt
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     G - C
                     T - A          T A
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  C       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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