The detailed information of tRNA gene sequence


Sequence ID>W131237117
Genome IDAUMV01000016
Search identical group
Phylum/ClassDeinococcota
SpeciesDeinococcus ficus DSM 19119 [AUMV]
Start position on genome 51782
End posion on genome 51857
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gaggaagcac
tRNA gene sequence 
GGGTTCTTAGCTCAGTTGGTAGAGCGGCGGTCTCCAAAACCGTAGGTCGAGGGTTCAAGT
CCTTCAGGGCCCGCCA
Downstream region at tRNA end position 
gacacacccc
Secondary structure (Cloverleaf model)
>W131237117	Trp	CCA
                   c      GCCA gacacacccc
                     G - C
                     G - C
                     G - C
                     T + G
                     T + G
                     C - G
                     T - A          T G
                    T     C T T C C     A
      T G A        A      | | + | |     A
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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