The detailed information of tRNA gene sequence


Sequence ID>W131237084
Genome IDAUMV01000002
Search identical group
Phylum/ClassDeinococcota
SpeciesDeinococcus ficus DSM 19119 [AUMV]
Start position on genome 1635
End posion on genome 1550
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tgtgacaact
tRNA gene sequence 
GGGTAGGTGGCCGAGTGGTTAAAGGCGACAGACTGTAAATCTGTTCTCGTAAGAGTACGG
CGGTTCGAATCCGCCCCTGCCCACCA
Downstream region at tRNA end position 
cgattcacgc
Secondary structure (Cloverleaf model)
>W131237084	Tyr	GTA
                   t      ACCA cgattcacgc
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T
                     G - C
                     G - C          T A
                    T     C C G C C     A
      T G A        G      | | | | |     G
    G       G C C G       G G C G G     C
    G         | | |                 T T
    T       A G G C
      T A A        G     TCTCGTAAGAGTAC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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