The detailed information of tRNA gene sequence


Sequence ID>W131237129
Genome IDAUMV01000028
Search identical group
Phylum/ClassDeinococcota
SpeciesDeinococcus ficus DSM 19119 [AUMV]
Start position on genome 11778
End posion on genome 11704
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
accaacatca
tRNA gene sequence 
GGGCGGTTAGCTCAGTGGTAGAGCATTCGCTTCACACGCGAAGGGTCGTAGGTTCAAGTC
CTATACCGCCCACCA
Downstream region at tRNA end position 
aatcatccca
Secondary structure (Cloverleaf model)
>W131237129	Val	CAC
                   a      ACCA aatcatccca
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T G
                    T     T A T C C     A
        G A        A      + | | | |     A
      T     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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