The detailed information of tRNA gene sequence


Sequence ID>W131104569
Genome IDAPCS01000023
Search identical group
Phylum/ClassDeinococcota
SpeciesDeinococcus wulumuqiensis R12 [APCS]
Start position on genome 12521
End posion on genome 12445
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agccaccttc
tRNA gene sequence 
GGCGACGTAGCTCAGCTGGTTAGAGCGCACGACTCATAATCGTGAGGTCGAGAGTTCAAG
TCTCTCTGTCGCCACCA
Downstream region at tRNA end position 
tcccacacag
Secondary structure (Cloverleaf model)
>W131104569	Met	CAT
                   c      ACCA tcccacacag
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G + T          T G
                    T     C T C T C     A
      C G A        A      | | | | |     A
    T       C T C G       G A G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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