The detailed information of tRNA gene sequence


Sequence ID>W131158343
Genome IDAQTY01000009
Search identical group
Phylum/ClassNitrospinota
SpeciesCandidatus Nitromaritima sp. SCGC AAA288-L16 SCGC AAA288-L16 [AQTY]
Start position on genome 42473
End posion on genome 42388
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaaaatgtag
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTTTAAGGCGGCGGTCTTGAAAACCGTTGTACGAAAGTACCGT
GGGTTCGAATCCTACTCCCTCCGCCA
Downstream region at tRNA end position 
ttttttgaca
Secondary structure (Cloverleaf model)
>W131158343	Ser	TGA
                   g      GCCA ttttttgaca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTACGAAAGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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