The detailed information of tRNA gene sequence


Sequence ID>W1711398841
Genome IDMFAQ01000009
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Collierbacteria bacterium RIFOXYD1_FULL_40_9 [MFAQ]
Start position on genome 49939
End posion on genome 49850
Amino Acid Ser
Anticodon ACT
Upstream region at tRNA start position 
tactcgtaat
tRNA gene sequence 
GGAGAGGTAGTCAAGTGGTCGAAGACAGCGGTTTACTAAACCGCCATATCTGTAAAAAGA
TATCCAGGGTTCGAATCCCTGCCTCTCCGCat
Downstream region at tRNA end position 
catatataat
Secondary structure (Cloverleaf model)
>W1711398841	Ser	ACT
                   t      GCat catatataat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        A      | | | | |     G
    G       A C T G       C A G G G     C
    G         | | |                 T T
    T       A G A C
      C G A        A     CATATCTGTAAAAAGATATC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    A C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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