The detailed information of tRNA gene sequence


Sequence ID>W1711398848
Genome IDMFAQ01000015
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Collierbacteria bacterium RIFOXYD1_FULL_40_9 [MFAQ]
Start position on genome 3501
End posion on genome 3428
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
aactacctga
tRNA gene sequence 
GGGCTCTTAGTTAAACGGTATAACATGGCATTCGCATTGCTAAGTTGGGGGTTCAATTCC
CCCAGAGTCCACAA
Downstream region at tRNA end position 
ttattaaatt
Secondary structure (Cloverleaf model)
>W1711398848	Ala	CGC
                   a      ACAA ttattaaatt
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     T - A          T T
                    T     C C C C C     A
        A A        A      | | | | |     A
      C     A T T G       G G G G G     C
      G     | | | |                 T T
      G     T A A C
        T A        A     AGTT
                    T - A
                    G + T
                    G - C
                    C - G
                    A - T
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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