The detailed information of tRNA gene sequence


Sequence ID>W131111419
Genome IDAPMB01000018
Search identical group
Phylum/ClassBacteroidota
SpeciesPorphyromonas gingivalis JCVI SC001 [APMB]
Start position on genome 16027
End posion on genome 16104
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
attgtcaaga
tRNA gene sequence 
GGGCCTATAGCTCAGCTGGTTTAGAGCATCTGCCTTACAAGCAGAGGGTCATAGGTTCGA
ATCCTATTGGGCCCACCT
Downstream region at tRNA end position 
tttttcaagc
Secondary structure (Cloverleaf model)
>W131111419	Val	TAC
                   a      ACCT tttttcaagc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     T A T C C     A
    T C G A        A      | | | | |     G
  G         C T C G       A T A G G     C
  G         | | | |                 T T
  T         G A G C
    T T A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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