The detailed information of tRNA gene sequence


Sequence ID>W1711402027
Genome IDMFRA01000005
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Magasanikbacteria bacterium RIFOXYD1_FULL_40_23 [MFRA]
Start position on genome 345717
End posion on genome 345628
Amino Acid Ser
Anticodon ACT
Upstream region at tRNA start position 
tccataatca
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTTAAGGCAGCAGTTTACTAAACTGCCGGGCTCGAAAGGGCC
TCTAGAGTTCGAATCTCTATCTCTCCGCCT
Downstream region at tRNA end position 
tcgcttcgcc
Secondary structure (Cloverleaf model)
>W1711402027	Ser	ACT
                   a      GCCT tcgcttcgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A T C T C     A
      T G A        G      | | | | |     G
    G       G C C G       T A G A G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGGGCTCGAAAGGGCCTC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    A C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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