The detailed information of tRNA gene sequence


Sequence ID>W1711402028
Genome IDMFRA01000005
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Magasanikbacteria bacterium RIFOXYD1_FULL_40_23 [MFRA]
Start position on genome 344748
End posion on genome 344661
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gacaacacct
tRNA gene sequence 
GGAGAGGTGTCAGAGTGGTCGATTGTGCAGCTTTGCTAAAGCTGTGTGCCGCAAGGCACC
GAGGGTTCGAATCCCTCCCTCTCCGCCT
Downstream region at tRNA end position 
tcgcttcgcc
Secondary structure (Cloverleaf model)
>W1711402028	Ser	GCT
                   t      GCCT tcgcttcgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C T       G A G G G     C
    G       + | |                   T T
    T       T T G T
      C G A        G     TGTGCCGCAAGGCACC
                    C - G
                    A - T
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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