The detailed information of tRNA gene sequence


Sequence ID>W131213793
Genome IDATTH01000001
Search identical group
Phylum/ClassRhodothermota
SpeciesSalisaeta longa DSM 21114 [ATTH]
Start position on genome 1998771
End posion on genome 1998845
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ttcttctgat
tRNA gene sequence 
GGGCTCTTAGCTCAGTGGTTTAGAGCGCTCGCCTCACACGCGAGAGGTCCCTGGTTCGAA
TCCAGGAGGGCCCACat
Downstream region at tRNA end position 
ctgcgcttct
Secondary structure (Cloverleaf model)
>W131213793	Val	CAC
                   t      ACat ctgcgcttct
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     T - A          T A
                    T     G G A C C     A
      T G A        A      | | | | |     G
    G       C T C G       C C T G G     C
    G       | | | |                 T T
    T       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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