The detailed information of tRNA gene sequence


Sequence ID>W1711404253
Genome IDMFXN01000031
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Peregrinibacteria bacterium RIFOXYC2_FULL_41_22 [MFXN]
Start position on genome 5379
End posion on genome 5286
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gccacatcgc
tRNA gene sequence 
GGAGAGGTACCCAAGTGGCTGAAGGGGCGGGTTTGCTAAACCTGTAGGGTGGATTTTTTC
CGCCGCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gataagctcg
Secondary structure (Cloverleaf model)
>W1711404253	Ser	GCT
                   c      GCCA gataagctcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    G       A C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TAGGGTGGATTTTTTCCGCCGC
                    C - G
                    G + T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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