The detailed information of tRNA gene sequence


Sequence ID>W1711408381
Genome IDMGMN01000041
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium RBG_13_48_10 [MGMN]
Start position on genome 5304
End posion on genome 5229
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tagcaaattt
tRNA gene sequence 
GGGCGCGTAGCTCAGTTGGTCAGAGCGCACGGTTCACATCCGTGAGGTTCGGAGGTTCGA
GCCCTCTCGCGCCCACtt
Downstream region at tRNA end position 
tgataatggt
Secondary structure (Cloverleaf model)
>W1711408381	Val	CAC
                   t      ACtt tgataatggt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          C G
                    T     T C T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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