The detailed information of tRNA gene sequence


Sequence ID>W1711408688
Genome IDMGNC01000114
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium RBG_13_60_13 [MGNC]
Start position on genome 6560
End posion on genome 6656
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ggcgcatagg
tRNA gene sequence 
GGGAGCGAGGAGGCTCCGGTGAGCTTCGCGGACTTCAAATCCGTTGAAGGGCATTTTCAA
TGTCCTTGGTGGGTTCGACTCCCATTCGCTCCCGCCA
Downstream region at tRNA end position 
ccctctgcta
Secondary structure (Cloverleaf model)
>W1711408688	SeC(p)	TCA
                   g      GCCA ccctctgcta
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T          T C
                    G     T A C C C     A
      C C T        G      + | | | |     G
    G       C G G A       G T G G G     C
    G       | | + |                 T T
    T       G C T T
      G A          C     TGAAGGGCATTTTCAATGTCCTTG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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