The detailed information of tRNA gene sequence


Sequence ID>W1711408782
Genome IDMGNI01000036
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium RBG_16_48_8 [MGNI]
Start position on genome 18581
End posion on genome 18676
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ttatttaaac
tRNA gene sequence 
GGGGGTGGTTGGGCTCCGGTGAGCTCCCCGGTCTTCAAAACCGGTGGCGGGTCGTTCAGC
GGGCCGCGGTGGGTTCGACTCCCATCCACTCCCGCCt
Downstream region at tRNA end position 
tactatttta
Secondary structure (Cloverleaf model)
>W1711408782	SeC(p)	TCA
                   c      GCCt tactatttta
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C
                     G - C          T C
                    T     T A C C C     A
      C C T        T      + | | | |     G
    G       C G G G       G T G G G     C
    G       | | + |                 T T
    T       G C T C
      G A          C     TGGCGGGTCGTTCAGCGGGCCGCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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