The detailed information of tRNA gene sequence


Sequence ID>W1711408833
Genome IDMGNJ01000106
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium RBG_16_50_11 [MGNJ]
Start position on genome 3195
End posion on genome 3120
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgttgtgcac
tRNA gene sequence 
AGGGGTGTAGCTCAGTTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTCGTGGGTTCGAGC
CCTGCCACCCCTGCCA
Downstream region at tRNA end position 
tccttccgcg
Secondary structure (Cloverleaf model)
>W1711408833	Trp	CCA
                   c      GCCA tccttccgcg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          C G
                    T     C G T C C     A
      T G A        A      | + + | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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