The detailed information of tRNA gene sequence


Sequence ID>W1711408849
Genome IDMGNK01000030
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium RBG_16_50_9 [MGNK]
Start position on genome 12225
End posion on genome 12321
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ccgactcaac
tRNA gene sequence 
GGGAGCGGATAAGTCCCGGTGGGCTTCGCGGACTTCAAATCCGTTGGGGGGCATTAATAA
TGTCCTCGGTGGGTTCGACCCCCATGCGCTCCCGCCA
Downstream region at tRNA end position 
gatttcatcc
Secondary structure (Cloverleaf model)
>W1711408849	SeC(p)	TCA
                   c      GCCA gatttcatcc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G   G          C C
                    A     T A C C C     A
      C C C        T      + | | | |     G
    G       T G A A       G T G G G     C
    G       + | | |                 T T
    T       G C T T
      G G          C     TGGGGGGCATTAATAATGTCCTCG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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