The detailed information of tRNA gene sequence


Sequence ID>W1711408942
Genome IDMGNN01000030
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium RBG_16_52_11 [MGNN]
Start position on genome 31343
End posion on genome 31437
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ctatccccct
tRNA gene sequence 
GGGGGTGGTTGGGTCCCGGTGGGCTCCCCGGTCTTCAAAACCGGTGGCGGGTCGCGTTGC
GGGCCGCGGTGGGTTCGACTCCCATCCACTCCCGCaa
Downstream region at tRNA end position 
ctgtttttat
Secondary structure (Cloverleaf model)
>W1711408942	SeC(p)	TCA
                   t      GCaa ctgtttttat
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C
                     G - C          T C
                    T     T A C C C     A
      C C C        T      + | | | |     G
    G       T G G G       G T G G G     C
    G       + | + |                 T T
    T       G C T C
      G G          C     TGGCGGGTCGCGTTGCGGGCCGCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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