The detailed information of tRNA gene sequence


Sequence ID>W1711409076
Genome IDMGNS01000116
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium RBG_16_57_11 [MGNS]
Start position on genome 1389
End posion on genome 1300
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caatttatgt
tRNA gene sequence 
GGAGAGGTCGCGTAGTCTGGCCTAGCGCGCACGCCTGGAGAGCGTGTTTCCCGCAAGGGA
ACGAGGGTTCAAATCCCTCCCTCTCCGCCT
Downstream region at tRNA end position 
aagaagagag
Secondary structure (Cloverleaf model)
>W1711409076	Ser	GGA
                   t      GCCT aagaagagag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        C      | | | | |     A
  T         T G C G       G A G G G     C
  G         + | | |                 T T
  G         G C G C
    C C T A        G     TTTCCCGCAAGGGAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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