The detailed information of tRNA gene sequence


Sequence ID>W1711409242
Genome IDMGOA01000024
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium RBG_16_64_43 [MGOA]
Start position on genome 14285
End posion on genome 14191
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
caatcctttt
tRNA gene sequence 
GGGGATGGCTGGGCCCCGGTGGGCCCCTCGGTCTTCAAAACCGCTGGCGGGTCGCTTGCG
AGCCGCGGTGGGTTCGACCCCCATCCATCCCCGCCt
Downstream region at tRNA end position 
agaggttcgg
Secondary structure (Cloverleaf model)
>W1711409242	SeC(p)	TCA
                   t      GCCt agaggttcgg
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C          C C
                    C     T A C C C     A
      C C C        T      + | | | |     G
    G       C G G G       G T G G G     C
    G       | | | |                 T T
    T       G C C C
      G G          C     TGGCGGGTCGCTTGCGAGCCGCG
                    T   C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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