The detailed information of tRNA gene sequence


Sequence ID>W1711409303
Genome IDMGOB01000100
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium RBG_16_68_14 [MGOB]
Start position on genome 19013
End posion on genome 19110
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
actgctgacc
tRNA gene sequence 
GGGAGTGGATGGGGCCCGGTGGCTCCCGCGGTCTTCAAAACCGTTGTCCCGACGCGCGAG
CGTCGGGAGGTGGGTTCGACTCCCATGCACTCCCGCCA
Downstream region at tRNA end position 
gtccgagagc
Secondary structure (Cloverleaf model)
>W1711409303	SeC(p)	TCA
                   c      GCCA gtccgagagc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T C
                    A     T A C C C     A
      C C C        T      + | | | |     G
    G       G G G G       G T G G G     C
    G       | + | |                 T T
    T       C T C C
      G G          C     TGTCCCGACGCGCGAGCGTCGGGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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