The detailed information of tRNA gene sequence


Sequence ID>W1711409306
Genome IDMGOC01000040
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium RBG_16_69_14 [MGOC]
Start position on genome 12182
End posion on genome 12278
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ccatcaggcc
tRNA gene sequence 
GGGAGCGGTCGGGTCCCGGTGGGTCCCCTGGTCTTCAAAACCAGTGGCGCGGCGCTCGGC
GCGGCGCGGTGGGTTCGACTCCCACGCGTTCCCGCCA
Downstream region at tRNA end position 
tggagggtag
Secondary structure (Cloverleaf model)
>W1711409306	SeC(p)	TCA
                   c      GCCA tggagggtag
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     G - C
                     G   G          T C
                    T     C A C C C     A
      C C C        C      | | | | |     G
    G       T G G G       G T G G G     C
    G       + + | |                 T T
    T       G T C C
      G G          C     TGGCGCGGCGCTCGGCGCGGCGCG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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