The detailed information of tRNA gene sequence


Sequence ID>W1711409347
Genome IDMGOD01000081
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium RBG_16_70_13 [MGOD]
Start position on genome 18330
End posion on genome 18426
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gcatctcggc
tRNA gene sequence 
GGGAGCGGGTTCGGGCCGGTGCCCGGCCCGGTCTTCAAAACCGGTGGCGCGGCGCTCGGC
GTCGCGCGGTGGGTTCGACTCCCATGCGCTCCCGCCA
Downstream region at tRNA end position 
gcggatgagc
Secondary structure (Cloverleaf model)
>W1711409347	SeC(p)	TCA
                   c      GCCA gcggatgagc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G   G          T C
                    G     T A C C C     A
      C C G        T      + | | | |     G
    G       G G C T       G T G G G     C
    G       | | | +                 T T
    T       C C G G
      G C          C     TGGCGCGGCGCTCGGCGTCGCGCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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