The detailed information of tRNA gene sequence


Sequence ID>W1711409407
Genome IDMGOP01000520
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium RIFOXYC12_FULL_59_14 [MGOP]
Start position on genome 3132
End posion on genome 3221
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcttgaacac
tRNA gene sequence 
GGAGAGGTCGCGTAGCCCGGCTTAGCGCGCACGCTTGGAAAGCGTGTAACCCAAAAAGGT
TCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
ccaacacaaa
Secondary structure (Cloverleaf model)
>W1711409407	Ser	GGA
                   c      GCCA ccaacacaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C C G A        C      | | | | |     G
  C         T G C G       G C G G G     C
  G         + | | |                 T T
  G         G C G C
    C T T A        G     TAACCCAAAAAGGTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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