The detailed information of tRNA gene sequence


Sequence ID>W1711409411
Genome IDMGOQ01000190
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium RIFOXYD12_FULL_57_15 [MGOQ]
Start position on genome 5280
End posion on genome 5206
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tagaaaccga
tRNA gene sequence 
TGCGGGGTAGAGCAGTGGCAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCGAGTC
CTGCCCCCGCTACCT
Downstream region at tRNA end position 
aatcaatcaa
Secondary structure (Cloverleaf model)
>W1711409411	Met	CAT
                   a      ACCT aatcaatcaa
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G T C C     A
        G A        A      | | | | |     G
      T     C G A G       G C A G G     C
      G     | | | |                 T T
      G     G C T C
        C A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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