The detailed information of tRNA gene sequence


Sequence ID>W1711410781
Genome IDMGQN01000017
Search identical group
Phylum/ClassUnclassified
SpeciesDeltaproteobacteria bacterium RBG_16_44_11 [MGQN]
Start position on genome 46090
End posion on genome 46187
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tttattccaa
tRNA gene sequence 
GGAAGTGCCAAGGTCACTGGTGGGCCTCCTGGACTTCAAATCCAGTGTGGGGCGCTAGAA
CCGTCCCGGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
gaaatttcct
Secondary structure (Cloverleaf model)
>W1711410781	SeC(p)	TCA
                   a      GCCA gaaatttcct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    C     T A C C C     A
      C A C        A      + | | | |     G
    T       T G G A       G T G G G     C
    G       + | | |                 T T
    G       G C C T
      T G G        C     TGTGGGGCGCTAGAACCGTCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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