The detailed information of tRNA gene sequence


Sequence ID>W1711410812
Genome IDMGQO01000050
Search identical group
Phylum/ClassUnclassified
SpeciesDeltaproteobacteria bacterium RBG_16_47_11 [MGQO]
Start position on genome 5918
End posion on genome 5824
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
cttaaagttt
tRNA gene sequence 
GGAAGTGGTTAGGTCCTGGTGGGCCTCCTGGACTTCAAATCCAGTGGCGGGCAGAAGATG
TCCGTGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
ggttggtttg
Secondary structure (Cloverleaf model)
>W1711410812	SeC(p)	TCA
                   t      GCCA ggttggtttg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    T     T A C C C     A
      T C C        T      + | | | |     G
    G       T G G A       G T G G G     C
    G       + | | |                 T T
    T       G C C T
      G G          C     TGGCGGGCAGAAGATGTCCGTG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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