The detailed information of tRNA gene sequence


Sequence ID>W1711410940
Genome IDMGQT01000105
Search identical group
Phylum/ClassUnclassified
SpeciesDeltaproteobacteria bacterium RBG_16_54_18 [MGQT]
Start position on genome 10344
End posion on genome 10249
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
caatagcaaa
tRNA gene sequence 
GGAAGTGGATAGGTCCCTGGTGGGCCTCCTGGACTTCAAATCCAGCGGCGGGTGTCAGAC
ATCCGCGGCGGGTTCGATTCCCGTACACTTCCGCCA
Downstream region at tRNA end position 
ttgttatgtt
Secondary structure (Cloverleaf model)
>W1711410940	SeC(p)	TCA
                   a      GCCA ttgttatgtt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   A          T T
                    A     T G C C C     A
      C C C        T      + | | | |     G
    T       T G G A       G C G G G     C
    G       + | | |                 T T
    G       G C C T
      T G G        C     CGGCGGGTGTCAGACATCCGCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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