The detailed information of tRNA gene sequence


Sequence ID>W1711411170
Genome IDMGSU01000212
Search identical group
Phylum/ClassUnclassified
SpeciesDeltaproteobacteria bacterium RIFOXYA12_FULL_61_11 [MGSU]
Start position on genome 3001
End posion on genome 2914
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgtgctagcT
tRNA gene sequence 
GGAGGAGTGGCCGAGTGGTTGATGGCGGCGGTCTTGAAAACCGTTGAGGCGAAAGCCTTC
GGGGGTTCGAATCCCTCCTCCTCCGTCt
Downstream region at tRNA end position 
tttcctgccg
Secondary structure (Cloverleaf model)
>W1711411170	Ser	TGA
                   T      GTCt tttcctgccg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G       + | | |                 T T
    T       T G G C
      T G A        G     TGAGGCGAAAGCCTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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