The detailed information of tRNA gene sequence


Sequence ID>W1711411268
Genome IDMGSX01000230
Search identical group
Phylum/ClassUnclassified
SpeciesDeltaproteobacteria bacterium RIFOXYB12_FULL_58_9 [MGSX]
Start position on genome 5574
End posion on genome 5486
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gagcaagcgc
tRNA gene sequence 
GGAGCGATGGCCGAGTTGGTCGAAGGCGCTTGACTCGAAATCAAGTGTGCCGCAAGGCAC
CGGGGGTTCGAATCCCTCTCGCTCCGCCA
Downstream region at tRNA end position 
gctctttcaa
Secondary structure (Cloverleaf model)
>W1711411268	Ser	CGA
                   c      GCCA gctctttcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | + | | |     G
  G         G C C G       G G G G G     C
  G           | | |                 T T
  T         A G G C
    C G A          G     TGTGCCGCAAGGCACC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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