The detailed information of tRNA gene sequence


Sequence ID>W1711411335
Genome IDMGSZ01000148
Search identical group
Phylum/ClassUnclassified
SpeciesDeltaproteobacteria bacterium RIFOXYC2_FULL_48_10 [MGSZ]
Start position on genome 5785
End posion on genome 5709
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaaagcatgc
tRNA gene sequence 
AGGTCAGTAGCTCCAATTGGCAGAGCTCCGGACTCCAAATCCGGGAGTTGGGGGTTCGAC
TCCCTCCTGACCTGCCA
Downstream region at tRNA end position 
cttttttaaa
Secondary structure (Cloverleaf model)
>W1711411335	Trp	CCA
                   c      GCCA cttttttaaa
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C          T C
                    T     C T C C C     A
      A A C        A      | + | | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        T     GAGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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