The detailed information of tRNA gene sequence


Sequence ID>W1711411343
Genome IDMGSZ01000255
Search identical group
Phylum/ClassUnclassified
SpeciesDeltaproteobacteria bacterium RIFOXYC2_FULL_48_10 [MGSZ]
Start position on genome 32009
End posion on genome 32100
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaattaatgc
tRNA gene sequence 
GGAGAGGTGGCCGAGCTGGCTGAAGGTGCACGCCTGGAAAGCGTGTGTACTCCAAAAGGG
TACCGAGGGTTCGAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
ctaaccatat
Secondary structure (Cloverleaf model)
>W1711411343	Ser	GGA
                   c      GCCA ctaaccatat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | +                 T T
  C         A G G T
    T G A          G     TGTACTCCAAAAGGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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