The detailed information of tRNA gene sequence


Sequence ID>W1711411456
Genome IDMGTC01000070
Search identical group
Phylum/ClassUnclassified
SpeciesDeltaproteobacteria bacterium RIFOXYD12_FULL_55_16 [MGTC]
Start position on genome 29640
End posion on genome 29737
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tgccgtggat
tRNA gene sequence 
GGAAGTGGAAAGGGTGCTGGTGATCTTCCCGGACTTCAAATCCGGTGCACCGGGTTAACA
GCCTGGTGGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
gttatgcttt
Secondary structure (Cloverleaf model)
>W1711411456	SeC(p)	TCA
                   t      GCCA gttatgcttt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      C G T        A      + | | | |     G
    T       G G G A       G T G G G     C
    G       + | + |                 T T
    G       T C T T
      T G A        C     TGCACCGGGTTAACAGCCTGGTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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