The detailed information of tRNA gene sequence


Sequence ID>W131110528
Genome IDAPJX01000010
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfotignum phosphitoxidans DSM 13687 [APJX]
Start position on genome 17979
End posion on genome 18071
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tccctgaatc
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTGAAGGCCCTGCTCTCGAAAAGCAGTATCCCGGCAAAACCG
GGATCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tcatatcaat
Secondary structure (Cloverleaf model)
>W131110528	Ser	CGA
                   c      GCCA tcatatcaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        C     TATCCCGGCAAAACCGGGATC
                    C - G
                    T - A
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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